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Article
BayesNDE: Bayesian Generative Modeling for Neural Density Estimation
Chenglin Li and
Qiao Liu
. arXiv, 2026.
Chenglin Li
,
Qiao Liu
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Code
DOI
MultiFlow: coupled flow matching for predicting single-cell multiomic perturbation responses in unseen cellular contexts
Haochen Wang, Charming Zhang, Mengran Zhang, Xiaoming Nie,
Qiao Liu
*
. bioRxiv, 2026.
Haochen Wang
,
Charming Zhang
,
Mengran Zhang
,
Xiaoming Nie
,
Qiao Liu
PDF
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Code
DOI
RegFM: an interpretable context-aware foundation model for human transcriptional regulation
Zijing Gao, Yining Sun, Haochen Wang, Rui Jiang,
Qiao Liu
*
. bioRxiv, 2026.
Zijing Gao
,
Yining Sun
,
Haochen Wang
,
Rui Jiang
,
Qiao Liu
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Code
DOI
scMTG reconstructs single-cell temporal dynamics with Markov transition generators
Xuejian Cui, Haochen Wang, Zijing Gao, Rui Jiang
*
, Wing Hung Wong
*
,
Qiao Liu
*
. bioRxiv, 2026.
Xuejian Cui
,
Haochen Wang
,
Zijing Gao
,
Rui Jiang
,
Wing Hung Wong
,
Qiao Liu
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Code
DOI
Conditional Attribute Estimation with Autoregressive Sequence Models
Erica Stutz, Giacomo Marino, Daniella Meeker,
Qiao Liu
, and Andrew J. Loza. arXiv, 2026.
Erica Stutz
,
Giacomo Marino
,
Daniella Meeker
,
Qiao Liu
,
Andrew J. Loza
PDF
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DOI
Missingness-aware Data Imputation via AI-powered Bayesian Generative Modeling
Qiao Liu
*
. arXiv, 2026.
Qiao Liu
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Code
DOI
BGM-IV: AI-Powered Bayesian Generative Modeling for Instrumental Variable Regression with High-Dimensional Covariates
Guyue Luo, Haidong Lu, Andrew J. Loza, and
Qiao Liu
. arXiv, 2026.
Guyue Luo
,
Haidong Lu
,
Andrew J. Loza
,
Qiao Liu
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Code
DOI
A Bayesian Generative Modeling Approach for Arbitrary Conditional Inference
Qiao Liu
*
and Wing Hung Wong. arXiv, 2026.
Qiao Liu
,
Wing Hung Wong
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Code
DOI
Leveraging genomic foundation models to identify genotype-brain-clinical pathways in Alzheimer's disease
Qiao Liu
†,*
, Zhaoyang Zhang
†
, Haochen Wang, Heping Zhang, Hongtu Zhu, Lexin Li
*
, Wing Hung Wong
*
. medRxiv, 2026.
Qiao Liu
,
Zhaoyang Zhang
,
Haochen Wang
,
Heping Zhang
,
Hongtu Zhu
,
Lexin Li
,
Wing Hung Wong
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